Ancient fossil meets modern technology

Part of a rock containing a fossil coral which is only just visible. Most of the fossil is hidden inside the rock.

Part of a rock containing a fossil coral which is only just visible. Most of the fossil is hidden inside the rock.

Diamond Light Source synchrotron facility at Didcot, Oxfordshire

Small fossils require large machines: the Diamond Light Source synchrotron facility at Didcot, Oxfordshire.

Fossils often need to be carefully prepared before they can be identified by palaeontologists and traditional methods can damage the specimen irreversibly. Scientists at Amgueddfa Cymru are experimenting with new technologies to study ancient fossils in minute detail with no damage to the specimen whatsoever.

The preparation of fossils for identification and study often requires the surrounding rock to be removed. A variety of tools are used for this, including specialist equipment such as pneumatic pens driven by compressed air and air-abrasive machines which work like miniature sandblasters. In some cases the surrounding rock can be dissolved away from the fossil

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Destructive techniques

These preparation methods will reveal the surface of a fossil but to identify some specimens we must look inside them. Certain fossil groups are routinely examined using destructive techniques. For example, to study the internal structure of corals, bryozoans and brachiopods, specimens are cut up (sectioned) into slices so thin that we can shine light through them and examine them under a microscope. These slices are known as 'thin sections'.

Sometimes it is not desirable to remove the rock or to cut up the specimen. The fossil may be very delicate and break during preparation. Or, if the fossil is very rare, we would rather not use a destructive technique as it may be difficult or even impossible to replace the fossil.

Non destructive X-Ray tomography

In these instances, it is now possible to use X-rays to build up a virtual three-dimensional image. The technique is called X-ray tomography. As rock is much denser than living tissue, X-ray tomography of fossils requires a more powerful radiation source than a hospital X-ray machine. The Diamond Light Source Synchrotron at Didcot, Oxfordshire is one such facility, the only one in the UK. This machine is in the shape of a giant donut with a diameter of 300 meters. It accelerates charged particles (electrons) through sequences of magnets to almost the speed of light, producing the X-rays.

This method was recently used by Amgueddfa Cymru scientists to investigate a small fossil found in Ordovician rocks 462 million years old in Iran. It was half buried in the rock and appeared to be a solitary rugose coral. The conventional approach to identifying rugose corals – to slice into thin sections – was rejected because of the small size and rarity of the specimen. Instead we took it to Didcot for X-ray tomography.

The new technique worked very well and we managed to obtain spectacular 3D images, and even and virtual thin sections – without any damage to the fossil itself. From these, we determined the internal structure of the fossil and concluded that the specimen was indeed a coral, probably a species of the genus Lambelasma.

It is approximately 5 million years older than the earliest previously described rugose coral, making it a significant addition to our knowledge of early life on our planet.

Part of a rock containing a fossil coral which is only just visible. Most of the fossil is hidden inside the rock.

Successive images from synchrotron X-ray tomography reveal the internal structures of the fossil coral

See Also:

Read the latest news from Diamond Light Sourse website: Researchers discover earliest record of rugose coral

Twelve more sleeps

I can’t believe it’s just twelve more sleeps until Christmas! I've sent you all a Christmas card in the post to thank you all for the hard work you have done so far.

This is the sixth and last week of recording until January so Merry Christmas from Baby Bulb and me.

I’ve really enjoyed all of the comments and questions I’ve had this year and look forward to answering more in the New Year.

I do hope you all have a fantastic break and return in January eager to see how your bulbs are doing. If you are concerned that your bulbs may not be safe over Christmas then take them home with you – but remember they must be keep outside in the cold!

The weather has been very cold in places over the last week or so but it is predicted that it will get warmer. Harwell Primary School reported -10 °c last Thursday. Very cold indeed! Can you confirm this is correct?

My favourite Christmas carol is the ‘The Holly and the Ivy’ because it contains two of our native evergreen plants. The Celts used these plants to celebrate the Winter Solstice and of course they are used by Christians to celebrate Christmas.

If you don’t know it, here are the lyrics: http://www.carols.org.uk/the_holly_and_the_ivy.htm

Your questions, my answers:

Greyfriars RC Primary School: We are really enjoying this! Prof.P: So glad to hear it!

DarranPark Primary: There aren't any signs of growth yet. Prof.P: Give it time; you should see something in January.

GlyncollenPrimary School: We have seen a pattern in our temperatures this week. We have also found out a way to stop our rain gauge from falling over. We hope we don't have any snow next week. From Glyncollen year 4 Prof.P: Great to hear you are seeing patterns in your weather data and that you have found a way to stop your rain gauge from falling over. Please let me know how you do it?

BalcurviePrimary School: We have had a lot of ice this week and freezing temperatures. We also had snow over last weekend and on Thursday. Prof.P: I hope it gets warmer for you at the weekend!

St Joseph's Primary School (Penarth): We have noticed how much colder is has got this week. There has been some ice on our plant pots and we feel really sorry for the poor bulbs! Prof.P: Don’t worry too much I’m sure they will be fine.

KilmaronSpecialSchool: Records for rainfall on days with negative temperatures may not be correct as the water had frozen and expanded so reading may be higher than actual water collected Prof.P: Thanks for letting me know Kilmaron; I will make a note of it. If it happens again melt it before you measure. Thanks

Ysgol Pencae: It rained cats and dogs on Friday and was milder. Did it rain more in Cardiff? Prof.P: We only had 10mms of rain in Cardiff a quarter of what you recorded!

Birds and berries

Snow has fallen in Ladybank Primary School in Scotland and Nether Kellet Primary School reported frozen rain in their rain gauge! Here in Cardiff too, we have begun to see frost in the mornings.

At this time of the year, birds get very hungry and start to feed on berries. This blackbird began eating the crab apples from the tree at the bottom of my garden. I don't cut the tree back so it becomes a good source of food for the birds in the winter. This is a female black bird - they are brown and don't have yellow beaks – so quite different to the males.

Don't forget to feed the birds over the winter. Find out how to make a speedy bird cake.

Sixty five schools sent in weather records this week! Thanks so much to all of you who sent in your recordings.

Your questions, my answers:

TorView Community School: Please accept the above data as being CORRECT for TorView CommunitySchool. The previous 'temperature' details were wrongly submitted in degrees 'Fahrenheit' instead of 'centigrade.' Prof.P: Well spotted! Thanks for letting me know, I will remove the Fahrenheit data from your charts. 

Medlar with Wesham CE Primary School: Hi professor plant there has a little bit of rain so we have not had to water them much. They are not growing yet but they are staying healthy. We are being very patient but we just can't wait for them to grow. Prof.P: Good things come to those who wait! It’s so nice when the flowers open in the spring. It cheers me up every year!

RogietPrimary School: How are you professor plant? It has been very cold here in Rogiet. Prof.P: I’m good thanks Rogiet, been cold here too, but I’m wrapping up warm. I hope you are too?

Your school: Westwood CP School: When I measure the rainfall on a Monday do I count the rainfall that fell over the weekend too. Or should I empty the contents when I get to school on Monday and measure at our usual time of 2pm? St. Mary's RC Primary School (Lancashire): What happens on Monday when the rain gauge includes Saturdays and Sunday? Prof.P: Hi Westwood & St Mary’s! Good question! You should measure the rainfall that fell over the weekend, that way we will know exactly how much rain has fallen that week.

LadybankPrimary School: We think our thermometer is broken because it was snowing today and it read 15 degrees. Prof.P: I will send you a new one immediately. Enjoy the snow! I’m very jealous.

Ysgol Pencae (Conwy): We had lots of rain over the weekend. The weather has got colder. We are measuring our rainfall in ml with a homemade gauge, is this correct? Prof.P: Hi Ysgol Pencae. Great that you have managed to build your own rain gauge! Please could you measure the rainfall in mm rather than ml. Everyone across the country measures in mm so in order to compare we need it in mms. See this video about how to do this. You will be able to convert the mls back into mm by pouting the amounts you measured into your rain gauge and seeing what the mms are. Hope that makes sense. Thanks

Ysgol Capelulo: This week has been really cold and wet. It was very wet on Monday and really cold on Thursday, on Wednesday and Thursday there was no rainfall. This week in Wales it has been very windy. We enjoy taking other people out to help us take the readings. Goodbye. :) Prof.P: Great idea getting others involved, glad you are enjoying!

KilmaronSpecialSchool: We have had to move the location of our rain funnel as one of the pupils in another class was caught emptying it out. It is now hidden behind a bush outside our classroom window. Prof.P: Oh dear, good plan to hide it!

St Joseph's Primary School (Penarth): We have noticed how much the temperature has fallen this week and we are concerned about our poor bulbs getting too cold! Prof.P: Don’t worry they will be expecting it to be cold at this time of year.

Greyfriars RC Primary School: One of our pots has been knocked over we are worrying about vandalism. Prof.P: Oh no! If you re-plant them they are often fine. If the vandals are from outside the school perhaps you should think if there is anywhere safer around the school? If they are from in the school you should talk to them.

Your school: Ysgol Porth Y Felin: To PP the plants are fine we have 2 plants that have started to grow and the temperatures are quite close apart from Thursday, when it was very cold. Prof.P: Gosh growing already!

St Mary's CatholicPrimary School: It has been very cold this week; we hope our bulbs are tucked up nice and warm in their pots. Prof.P: I’m sure they will be fine!

Thorneyholme RC Primary School: Yo prof plant hows it rollin'!!!!????? Cute little bulbs are part of our school now. Prof.P: Great to hear they have settled in.

Nether Kellet Primary School: Today the water froze cool as ice!! Prof.P: Brrrrgh! To get the measurement you need to bring it in to defrost to water.

Many thanks

Prof.P

 

"It's beggining to feel at lot like Winter!"

What a week! More floods and now turning Frosty!

The highest rain record this week came from Thorneyholme RC Primary School and Westwood CP School both with 100mms of rain. As WestwoodSchool pointed out this week they are very lucky to not live by a river. Some schools who received less rain but did get flooding in their locality.

Nant Y Coed School explained:  We've actually had 23mm of rain since yesterday. There was lots of flooding in the area and some of the teachers couldn't get home at all and some didn’t get home until nearly midnight.

Study the maps to see why. If you click on the option that says 'Terrain' in Google maps you will be able to see all the contours of the mountains and hills. If you follow this link to where Ysgol Nant Y Coed school is situated you will see that when the rain falls in the surrounding area it all collects and runs to  Llandudno Junction area - so if there is very heavy rainfall the area may flood. If you look at the Environment Agency flood map it highlights the areas that suffer from flooding and you will see that the areas around does flood just as the school reported.

Take a look at different areas in your locality and see if you can predict if or why certain areas flood. Then visit the environment agency flood map to see where the areas of high risk are.

This link has some animations about the different factors that cause a flood.

Oakfield Primary asks: Is the rainfall heavy for this time of year? Prof.P: Good question! Our records show that the average rainfall since we began recording are around 150mm of rain in November in Wales. We can't compare this figure until the end of the month but in some places 100mm of rain have fallen in a day! So yes it is high for this time of year. 

Your questions, my answers:

Thorneyholme RC Primary School: The bulb is so cute!!
########## hash tag (no reason at all someone in class is obsessed with hash tags!) See you next week p plant. Thorneyholme xoxo Prof.P: High #Thorneyholme #Prof.P

Ysgol Capelulo: It rained a lot on Thursday but it was very windy so not a lot of rain went into the rain collector, but there was a lot of rain on Thursday night. It also rained a lot on Wednesday night. The temperature on Tuesday was quiet warm. Prof.P: Great recording!

Stanford in the ValePrimary School: What a week.... Floods on Wednesday, Thursday high winds and blue skies Friday!
Stanford Gardening Club Prof.P: Yes a very crazy week of weather!

Stepping StonesShortStaySchool
We have wondered about the rainfall records - we were putting the rain gauge out each morning, but then thought this isn't recording all the rain at night we have had recently? We are now leaving it out all the time in between emptying it at about 2:30 each afternoon. We hope this is ok?  Prof.P: Great, well spotted, I leave mine out so it collects all the rain too then just empty it once a day.

Ysgol Porth Y Felin. Hello P.P we are very amazed about Thursday because of all the floods!!! There aren’t many differences between the temperatures but there’s quite a lot in the rainfall! Happy planting!!!!  Prof.P: Yes so much rain falling some days!

GlyncollenPrimary School
We have had a lot of rain this week and the strong wind blew our water gauge down so we hope our rainfall measurement is accurate. Prof.P: Thanks for letting me know, this can’t be helped sometimes mine falls over too!

St Joseph's Primary School (Penarth) we have been very excited about taking measurements this week. We were interested to see that, so much rain fell on Tuesday night, our car park was flooded! Prof.P: Gosh, I hope none of the cars were flooded, glad you’re enjoying!

Greyfriars RC Primary School
I love the plants there doing very well. Prof.P: Great news Greyfriars!

CadoxtonPrimary School
Friday rainfall could have been more than 50 ml but measurer stopped at 50. Prof.P: Gosh, perhaps you need a bigger rain gauge?

LadybankPrimary School
Problem of people standing on our plants but we are working to get it sorted. Prof.P: Oh dear! I do hope you manage to sort it out – please let me know.

Thanks

Prof.P

 

We have completed our work on the Wallace Palms!

Over recent months, botanical conservators Vicky Purewal and Annette Townsend have been carrying out painstaking work on a series of eleven historical palm specimens. They were collected around 1850 by the renowned British naturalist and explorer Alfred Russell Wallace (1823-1913) during his travels in the Amazon. Wallace is best known for his studies on evolution, which helped trigger the publication of Charles Darwin’s ground breaking research ‘Origin of Species’.

The Wallace palms reside at the Royal Botanic Gardens, Kew and the curators there requested that Vicky and Annette, who are specialist conservators in botanical collections at AC-NMW, carry out the necessary conservation work. The specimens are over 150 years old and had to endure adverse conditions in the hold of a ship, and then later to contend with soot and pollution from Battersea Power station. The palms were understandably very fragile and in need of plenty of careful cleaning, re-structuring and repackaging so that their true splendour could be appreciated by all. The palms have been re-housed in custom made boxes so that they can travel back to Kew safely and are also now fit for display.

You will be able to see the palms for yourself on display at AC-NMW in Oct 2013, as RBG Kew will be loaning some of the collection for our Wallace’s bicentenary exhibition and celebrations.